As long as Kyoko's not raising any objections, then it should be fine. Shinji is still... not sure how well he's actually going to be able to sleep, even with the relief of having found his most important people, so there's very little risk of anyone getting kicked out on accident. This is the kind of situation where the closeness should be welcome, and they shouldn't be worrying too much about a luxurious stay in the situation they're in anyway.
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As long as Kyoko's not raising any objections, then it should be fine. Shinji is still... not sure how well he's actually going to be able to sleep, even with the relief of having found his most important people, so there's very little risk of anyone getting kicked out on accident. This is the kind of situation where the closeness should be welcome, and they shouldn't be worrying too much about a luxurious stay in the situation they're in anyway.
"It's fine," he agrees. "Thank you."